PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Kalax.0109s0010.2.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; Saxifragales; Crassulaceae; Kalanchoe
Family B3
Protein Properties Length: 121aa    MW: 13430.6 Da    PI: 11.2589
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Kalax.0109s0010.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B339.51e-127673498
                         SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
                   B3 34 ktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                           + l  + g++W+v +    k++  ++ kGWk Fvk n + + Df+vF++ g++ f  +v++f 
  Kalax.0109s0010.2.p  7 NCVNLVVSGGQKWRVGF--VVKRKDWFFYKGWKAFVKGNAVSSFDFLVFRYLGSMAF--HVSIFG 67
                         458888999********..66666678999***********************9999..999986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd100172.40E-8166No hitNo description
PROSITE profilePS5086312.478169IPR003340B3 DNA binding domain
Gene3DG3DSA:2.40.330.107.4E-16471IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019361.55E-14571IPR015300DNA-binding pseudobarrel domain
PfamPF023622.9E-9766IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 121 aa     Download sequence    Send to blast
MKGEKGNCVN LVVSGGQKWR VGFVVKRKDW FFYKGWKAFV KGNAVSSFDF LVFRYLGSMA  60
FHVSIFGPNG CAKLSASSGD LPKAVGVDTE KRRQNRQNLL KRVQMGSEKR GPGRHHGMSF  120
*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34400.12e-10B3 family protein